http://www.k-wave.org/forum/topic/incorrect-minor-version-of-the-hdf5-file-error Support for the k-Wave MATLAB toolbox en-US Wed, 13 May 2026 09:12:28 +0000 http://bbpress.org/?v=1.0.2 q http://www.k-wave.org/forum/search.php http://www.k-wave.org/forum/topic/incorrect-minor-version-of-the-hdf5-file-error#post-7514 Thu, 21 May 2020 11:13:10 +0000 Bradley Treeby 7514@http://www.k-wave.org/forum/ <p>Hi frankiepoon1991,</p> <p>Could you try updating your version of k-Wave (and the C++ binaries) to V1.3?</p> <p>Brad. </p> http://www.k-wave.org/forum/topic/incorrect-minor-version-of-the-hdf5-file-error#post-7488 Thu, 07 May 2020 01:13:38 +0000 frankiepoon1991 7488@http://www.k-wave.org/forum/ <p>I try to run the example_pr_3D_TR_planar_sensor using the GPU code. While calling the function kspaceFirstOrder3DC, the eval_string is not running. I got the following error:</p> <p>Running k-Wave simulation...<br /> start time: 07-May-2020 01:09:07<br /> reference sound speed: 1500m/s<br /> dt: 40ns, t_end: 8.44us, time steps: 212<br /> input grid size: 12 by 44 by 44 grid points (2.4 by 8.8 by 8.8mm)<br /> maximum supported frequency: 3.75MHz<br /> expanding computational grid...<br /> computational grid size: 32 by 64 by 64 grid points<br /> precomputation completed in 0.46524s<br /> saving input files to disk...<br /> completed in 2.2741s<br /> ┌───────────────────────────────────────────────────────────────┐<br /> │ kspaceFirstOrder3D-CUDA v1.2 │<br /> ├───────────────────────────────────────────────────────────────┤<br /> │ Reading simulation configuration: Failed │<br /> └───────────────────────────────────────────────────────────────┘<br /> ┌───────────────────────────────────────────────────────────────┐<br /> │ !!! K-Wave experienced a fatal error !!! │<br /> ├───────────────────────────────────────────────────────────────┤<br /> │ Error: Incorrect minor version of the HDF5 file /cs/research/ │<br /> │ vision/LargeScaleProject/k-Wave/tmp/kwave_input_ │<br /> │ data07-May-2020-01-09-06.h5 (expected is 1).: │<br /> │ iostream error │<br /> ├───────────────────────────────────────────────────────────────┤<br /> │ Execution terminated │<br /> └───────────────────────────────────────────────────────────────┘</p> <p>My system is Centos7 with CUDA 10.2. I am using Matlab 2017a and k-Wave 1.2</p> <p>Looking forward to hearing back from you. </p>