k-Wave User Forum » Topic: problem with installation

k-Wave User Forum » Topic: problem with installation http://www.k-wave.org/forum/topic/problem-with-installation Support for the k-Wave MATLAB toolbox en-US Tue, 12 May 2026 23:07:22 +0000 http://bbpress.org/?v=1.0.2 <![CDATA[Search]]> q http://www.k-wave.org/forum/search.php vernal on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-212 Wed, 27 Jul 2011 15:57:31 +0000 vernal 212@http://www.k-wave.org/forum/ That did it! All products wasn't checked, k-wave was in the list but also unchecked. Problem solved! Thank you very much :-) bencox on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-210 Wed, 27 Jul 2011 14:09:07 +0000 bencox 210@http://www.k-wave.org/forum/ Hi Vernal, Under File > Preferences > Help does it have 'All Products' checked? Can you see the k-Wave Toolbox in the list on that page? Ben vernal on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-208 Wed, 27 Jul 2011 09:42:58 +0000 vernal 208@http://www.k-wave.org/forum/ Thanks for your quick reply! I had already added the k-wave folder (with subfolders) to the Matlab path manually and it is in the list. (Matlab has undergone several restarts by now and the PC has also been booted freshly several times). It also appears in the Matlab start button menu in the toolboxes section. It has only one entry for the web page. I'm running WinXP SP3. Any more ideas? Bradley Treeby on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-206 Wed, 27 Jul 2011 00:51:39 +0000 Bradley Treeby 206@http://www.k-wave.org/forum/ Hi Vernal, Two things to check, if you restart MATLAB and then use File -> Setpath from the main MATLAB window, does the k-Wave Toolbox appear in the list of folders? Also, do you see the k-Wave entry under MATLAB start button -> Toolboxes? Are you running windows / linux / mac os? Brad. vernal on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-202 Tue, 26 Jul 2011 16:08:33 +0000 vernal 202@http://www.k-wave.org/forum/ I have the same problem as redcloud, however it persists with Matlab 2011a. The "help k-wave" command succeeds but it doesn't appear in the Matlab help browser. According to the instructions given here: <a href="http://www.mathworks.com/matlabcentral/fileexchange/21367-adding-help-and-demos-to-the-help-browser/content/html/howto.html" rel="nofollow">http://www.mathworks.com/matlabcentral/fileexchange/21367-adding-help-and-demos-to-the-help-browser/content/html/howto.html</a> I could make the help searchable (a helpsearch folder has been created and about 450 kB is in there) and I see the k-wave toolbox also in "Start > Desktop Tools > View Start Button Configuration Files." I tried to change the header of the info.xml to the template given here: <a href="http://www.mathworks.com/support/solutions/en/data/1-1C77F/index.html?solution=1-1C77F" rel="nofollow">http://www.mathworks.com/support/solutions/en/data/1-1C77F/index.html?solution=1-1C77F</a> but it didn't work. What can I try to have the help appear in the browser? Cheers vernal redcloud on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-191 Fri, 08 Jul 2011 02:02:54 +0000 redcloud 191@http://www.k-wave.org/forum/ Hi,Brad The trouble is resloved by upgrading MATLAB 6.5 to MATLAB 9.0. Thank you! Bradley Treeby on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-190 Thu, 07 Jul 2011 07:52:34 +0000 Bradley Treeby 190@http://www.k-wave.org/forum/ Did you install the toolbox by adding the k-Wave folder to the MATLAB path using File -> Set Path -> Add Folder (from the main MATLAB window), or did you add the path to a startup.m file? Perhaps try the alternate method if the other is not working. You will need to restart MATLAB before k-Wave will appear in the help menu. What version of MATLAB are you using? Brad. redcloud on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-189 Thu, 07 Jul 2011 03:31:05 +0000 redcloud 189@http://www.k-wave.org/forum/ I met the same problem above and try the methods mentioned. 1）（ k-Wave won't appear in the drop-down help menu, but if you click the blue circular '?' button it should appear among the list of toolboxes on the left. Is it there?） When I try this method, k-wave also isn't appear. 2) (What happens if you type >> help k-wave at the command prompt? ) When I try this method, something appears as follows: ------------ >> help k-wave k-Wave Toolbox Version B.0.3 Released: 15th February 2011 Authors: Bradley Treeby and Ben Cox See k-Wave Toolbox in help menu for description and examples. Type "help <command-name>" for documentation on individual commands. ----------------------------------------------------------------- Wave Propagation kspaceFirstOrder1D - 1D time-domain simulation of wave propagation kspaceFirstOrder2D - 2D time-domain simulation of wave propagation kspaceFirstOrder3D - 3D time-domain simulation of wave propagation kspaceSecondOrder - Fast time-domain simulation of wave propagation for homogeneous media Image Reconstruction kspaceLineRecon - 2D linear FFT reconstruction kspacePlaneRecon - 3D planar FFT reconstruction Geometry Creation makeBall - Create a binary map of filled ball within a 3D grid makeCartCircle - Create a 2D Cartesian circle or arc makeCartSphere - Create a 3D Cartesian sphere makeCircle - Create a binary map of a circle within a 2D grid makeDisc - Create a binary map of a filled disc within a 2D grid makeSphere - Create a binary map of a sphere within a 3D grid Absorption attenuationWater - Calculate ultrasound attenuation in distilled water db2neper - Convert decibels to nepers neper2db - Convert nepers to decibels powerLawKramersKronig - Calculate dispersion for power law absorption Grid Utilities cart2grid - Interpolate a set of Cartesian points onto a binary grid expandMatrix - Enlarge a matrix by extending the edge values grid2cart - Return the Cartesian coordinates of the non-zero points of a binary grid interpCartData - Interpolate data from a Cartesian to a binary sensor mask interpftn - Resample data using Fourier interpolation loadImage - Load an image file makeGrid - Create k-space grid structure numDim - Return the number of matrix dimensions resize - Resize a matrix unmaskSensorData - Reorder data recorded using a binary sensor mask voxelPlot - 3D plot of voxels in a binary matrix Filtering and Spectral Utilities applyFilter - Filter input with low, high, or band pass filter filterTimeSeries - Filter signal using the Kaiser windowing method getAlphaFilter - Create filter for medium.alpha_filter getWin - Return a frequency domain windowing function spectrum - Compute the single sided amplitude and phase spectrums smooth - Smooth a matrix Other Utilities addNoise - Add Gaussian noise to a signal for a given SNR benchmark - Run performance benchmark flyThrough - Display a three-dimensional matrix slice by slice fwhm - Compute the full width at half maximum gaussian - Create a Gaussian distribution getColorMap - Return default k-Wave color map getDateString - Create a string of the current date and time getkWavePath - Return pathname to the k-Wave Toolbox makeTime - Create an evenly spaced array of time points saveTiffStack - Save volume data as a tiff stack scaleSI - Scale a number to nearest SI unit prefix scaleTime - Convert seconds to hours, minutes, and seconds speedSoundWater - Calculate the speed of sound in water with temperature toneBurst - Create an enveloped single frequency tone burst --------------- I use windows XP. bencox on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-105 Mon, 07 Mar 2011 17:53:55 +0000 bencox 105@http://www.k-wave.org/forum/ Sorry to hear you're still having trouble. Two things to check quickly: 1) k-Wave won't appear in the drop-down help menu, but if you click the blue circular '?' button it should appear among the list of toolboxes on the left. Is it there? 2) What happens if you type >> help k-wave at the command prompt? Ben hadasara on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-104 Mon, 07 Mar 2011 15:48:20 +0000 hadasara 104@http://www.k-wave.org/forum/ Yes, I see it on both ways you've mentioned, but not in the help menu. I use windows XP. what does it meen? that I can use the toolbox commands but can't see the help about it? Thankk you very much!! bencox on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-103 Thu, 03 Mar 2011 12:44:08 +0000 bencox 103@http://www.k-wave.org/forum/ If you type path at the Matlab prompt (>> path) it will output a list of the directories that it can see. Is the k-Wave Toolbox directory in that list? Alternatively you can see the directories on the Matlab path from the dropdown menus in File, Set Path. Are you using Linux? Is there a permissions problem when Matlab tries to save the updated path file (pathdef.m)? Ben hadasara on "problem with installation" http://www.k-wave.org/forum/topic/problem-with-installation#post-102 Thu, 03 Mar 2011 11:46:15 +0000 hadasara 102@http://www.k-wave.org/forum/ Hi, I did all the steps in order to install the toolbox, but still I don't see the toolbox in the help menue. Thanks!