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writeGrid

Write grid and PML properties to a k-Wave HDF5 file

Syntax

writeGrid(filename, grid_size, grid_spacing, pml_size, pml_alpha, Nt, dt, c_ref)

Description

writeGrid creates and writes the wavenumber grids and PML variables required by the k-Wave C++ code to the HDF5 file specified by the user.

List of parameters that are written:

  • Nx
  • Nx
  • Ny
  • Nz
  • Nt
  • dt
  • dx
  • dy
  • dz
  • c_ref
  • ddx_k_shift_pos_r
  • ddx_k_shift_neg_r
  • ddy_k_shift_pos
  • ddy_k_shift_neg
  • ddz_k_shift_pos
  • ddz_k_shift_neg
  • x_shift_neg_r
  • y_shift_neg_r
  • z_shift_neg_r
  • pml_x_sgx
  • pml_y_sgy
  • pml_z_sgz
  • pml_x
  • pml_y
  • pml_z
  • pml_x_alpha
  • pml_y_alpha
  • pml_z_alpha
  • pml_x_size
  • pml_y_size
  • pml_z_size

Inputs

filename

name of HDF5 file to write matrix to

grid_size

[Nx, Ny, Nz]

grid_spacing

[dx, dy, dz]

pml_size

[pml_x_size, pml_y_size, pml_z_size]

pml_alpha

[pml_x_alpha, pml_y_alpha, pml_z_alpha]

Nt

number of time points

dt

time step

c_ref

scalar sound speed used in the k-space operator and to define the pml variables

See Also

writeAttributes, writeFlags, writeMatrix


© 2009-2014 Bradley Treeby and Ben Cox.